MEEP on the cluster: Difference between revisions

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To run MEEP on the cluster, best write a bash script with a slurm header (read the doc or ask someone for a template)
To run MEEP on the cluster, best write a bash script with a slurm header (read the doc or ask someone for a template)

You can also run the simulation on the cluster without a bash script:


Copy your meepfile.py to the cluster and type the command:
Copy your meepfile.py to the cluster and type the command:

Latest revision as of 08:42, 19 January 2023

To run MEEP on the cluster, best write a bash script with a slurm header (read the doc or ask someone for a template)

You can also run the simulation on the cluster without a bash script:

Copy your meepfile.py to the cluster and type the command:

srun -p einc singularity exec --app dls /containers/testing/c15874p15_2022-11-30_1.img mpirun -np X* python3 meepfile.py

  • X: if you use a bash file with a slurm header make sure to put the same value for X as for "--cpus-per-task"